Contents
3
1
Contents
Improvements to Version 3.0 of CAP
4
Introduction
6
Quick guide to running a data set
8
Installation
7
General instructions
9
Obtaining Help
111
Opening a data set
15
Demonstration data sets
16
Creating and editing a data set
18
Preparing large data sets in a spreadsheet
18
Data entry from within CAP
19
Editing existing data
20
Saving edited data or creating a new data file
20
Data set statistics
30
Maximum size of the data set
21
Methods offered by CAP
7
Principal Components Analysis  PCA
53
Non Metric Multidimensional scaling
58
Reciprocal Averaging RA
67
Detrended Correspondence Analysis DECORANA
64
Two way indicator species analysis TWINSPAN
70
Agglomerative cluster analysis
75
Divisive cluster analysis
80
Similarity measures
82
Association analysis
96
Experimental methods: 
Species Filtering
98
Working Data Screen
40
Data transformations
39
Relative adjustments
41
Dealing with zeros
39
Transposing data
42
Printing, saving and exporting charts
23
Common errors and problems
10
References
111
Contacting PISCES for help
111
Other Programs by PISCES Conservation Ltd
102
Worked Example
112
 using demonstration data
Copyright 2004, PISCES CONSERVATION LTD





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